Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer pilus assembly protein tralSAMN06295920_11822Not AvailablePositive5023444 - 502373410695.3
conjugal transfer pilus assembly protein traeSAMN06295920_11823Not AvailablePositive5023736 - 502430221157.7
conjugal transfer pilus assembly protein trakSAMN06295920_11824Not AvailablePositive5024302 - 502509928004.3
conjugal transfer pilus assembly protein trabSAMN06295920_11825Not AvailablePositive5025104 - 502642946811.3
thiol:disulfide interchange protein dsbcSAMN06295920_11826Not AvailablePositive5026416 - 502728830635.8
conjugal transfer pilus assembly protein travSAMN06295920_11827Not AvailablePositive5027285 - 502826532883.4
conjugal transfer atp-binding protein tracSAMN06295920_11828Not AvailablePositive5028267 - 503085895674.2
hypothetical proteinSAMN06295920_11829Not AvailablePositive5030862 - 503122112858.9
type-f conjugative transfer system protein (trbi_ftype)SAMN06295920_11830Not AvailablePositive5031214 - 503186722658.3
conjugal transfer pilin signal peptidase trbiSAMN06295920_11831Not AvailablePositive5031848 - 503238419167.3

Displaying genes 4831 – 4840 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.