Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron complex outermembrane recepter proteinSAMN06295920_1178Not AvailableNegative4959375 - 496151376652.2
transcriptional regulator, rpir familySAMN06295920_1179Not AvailablePositive4961685 - 496261433918.8
l-alanine-dl-glutamate epimeraseSAMN06295920_11710Not AvailablePositive4962919 - 496399838370.1
zn-dependent amino-or carboxypeptidase, m28 familySAMN06295920_11711Not AvailablePositive4963986 - 496558156461.3
outer membrane receptor proteins, mostly fe transportSAMN06295920_11712Not AvailableNegative4965650 - 496798084414.5
(s)-mandelate dehydrogenaseSAMN06295920_11713Not AvailableNegative4968054 - 496922341530.2
pimeloyl-acp methyl ester carboxylesteraseSAMN06295920_11714Not AvailableNegative4969254 - 497024035005.8
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_11715Not AvailableNegative4970380 - 497118328727.8
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN06295920_11716Not AvailableNegative4971197 - 497199128135.9
n-methylhydantoinase aSAMN06295920_11717Not AvailableNegative4971999 - 497407174104.5

Displaying genes 4771 – 4780 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.