Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN06295920_11481 | Not Available | Negative | 4771681 - 4772028 | 12155.6 |
| d-amino-acid dehydrogenase | SAMN06295920_11482 | Not Available | Negative | 4772051 - 4773307 | 44632.9 |
| alanine racemase | SAMN06295920_11483 | Not Available | Negative | 4773304 - 4774440 | 40358.3 |
| transcriptional regulator, asnc family | SAMN06295920_11484 | Not Available | Positive | 4774572 - 4775024 | 16648.0 |
| hypothetical protein | SAMN06295920_11485 | Not Available | Negative | 4775035 - 4775280 | 8803.24 |
| hypothetical protein | SAMN06295920_11486 | Not Available | Positive | 4775596 - 4778082 | 90085.5 |
| hypothetical protein | SAMN06295920_11487 | Not Available | Positive | 4778110 - 4781253 | 111188.0 |
| caspase domain-containing protein | SAMN06295920_11488 | Not Available | Positive | 4781291 - 4783123 | 65383.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06295920_11489 | Not Available | Positive | 4783261 - 4783932 | 24243.4 |
| hypothetical protein | SAMN06295920_11490 | Not Available | Negative | 4784073 - 4785551 | 51978.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.