Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06295920_11471 | Not Available | Negative | 4764536 - 4765732 | 44092.4 |
| hypothetical protein | SAMN06295920_11472 | Not Available | Negative | 4765746 - 4765958 | 7591.63 |
| hypothetical protein | SAMN06295920_11473 | Not Available | Positive | 4766177 - 4766518 | 11718.0 |
| hypothetical protein | SAMN06295920_11474 | Not Available | Positive | 4766515 - 4766700 | 6950.11 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06295920_11475 | Not Available | Positive | 4766829 - 4767599 | 28992.1 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN06295920_11476 | Not Available | Positive | 4767596 - 4768297 | 25612.4 |
| conserved hypothetical protein | SAMN06295920_11477 | Not Available | Negative | 4768337 - 4768789 | 16913.2 |
| polyketide cyclase / dehydrase and lipid transport | SAMN06295920_11478 | Not Available | Positive | 4769035 - 4769628 | 21991.5 |
| threonine dehydrogenase | SAMN06295920_11479 | Not Available | Positive | 4769628 - 4770806 | 42677.2 |
| short-chain dehydrogenase | SAMN06295920_11480 | Not Available | Positive | 4770818 - 4771603 | 27852.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.