Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase | SAMN06295920_101334 | Not Available | Positive | 349651 - 351816 | 81484.5 |
| undecaprenyl-diphosphatase | SAMN06295920_101335 | Not Available | Negative | 351803 - 352414 | 21682.4 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN06295920_101336 | Not Available | Positive | 352525 - 354009 | 53372.6 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN06295920_101337 | Not Available | Positive | 354213 - 356108 | 68651.0 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN06295920_101338 | Not Available | Positive | 356148 - 356771 | 23378.8 |
| ribonuclease d | SAMN06295920_101339 | Not Available | Negative | 356774 - 357961 | 43744.9 |
| aspartyl-trna synthetase | SAMN06295920_101340 | Not Available | Positive | 358046 - 359827 | 65916.7 |
| polyphosphate kinase 2, ppk2 family | SAMN06295920_101341 | Not Available | Positive | 360080 - 360865 | 30608.2 |
| dna-binding protein hu-beta | SAMN06295920_101342 | Not Available | Positive | 361004 - 361276 | 9586.52 |
| Trna-val | Not Available | Not Available | Positive | 361477 - 361548 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.