Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase, cu-zn family | SAMN06295920_11441 | Not Available | Positive | 4738881 - 4739429 | 18146.7 |
| protein-tyrosine phosphatase | SAMN06295920_11442 | Not Available | Positive | 4739426 - 4739911 | 17338.3 |
| 2'-5' rna ligase | SAMN06295920_11443 | Not Available | Negative | 4739896 - 4740429 | 19280.2 |
| hypothetical protein | SAMN06295920_11444 | Not Available | Positive | 4740572 - 4741300 | 25799.9 |
| polymer biosynthesis protein, wecb/taga/cpsf family | SAMN06295920_11445 | Not Available | Positive | 4741394 - 4742149 | 28089.0 |
| glutathione s-transferase | SAMN06295920_11446 | Not Available | Negative | 4742109 - 4742711 | 22051.7 |
| carboxymethylenebutenolidase | SAMN06295920_11447 | Not Available | Negative | 4742708 - 4743589 | 30994.1 |
| hypothetical protein | SAMN06295920_11448 | Not Available | Negative | 4743608 - 4743982 | 12348.9 |
| udp-glucuronate 4-epimerase | SAMN06295920_11449 | Not Available | Negative | 4743972 - 4744970 | 36578.4 |
| Trna-gln | Not Available | Not Available | Positive | 4745067 - 4745141 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.