Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_11344Not AvailableNegative4651180 - 465194425800.2
meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductaseSAMN06295920_11345Not AvailableNegative4651952 - 465269225172.1
transcriptional regulator, xre family with cupin sensorSAMN06295920_11346Not AvailablePositive4652810 - 465340921726.1
iron complex outermembrane recepter proteinSAMN06295920_11347Not AvailableNegative4653511 - 465573381044.1
kynureninaseSAMN06295920_11348Not AvailablePositive4655905 - 465714044544.5
predicted arabinose efflux permease, mfs familySAMN06295920_11349Not AvailableNegative4657173 - 465855848032.2
catechol 2,3-dioxygenaseSAMN06295920_11350Not AvailableNegative4658610 - 465902014197.1
acyl-coa synthetase (amp-forming)/amp-acid ligase iiSAMN06295920_11351Not AvailablePositive4659167 - 466071755580.9
acyl-coa dehydrogenaseSAMN06295920_11352Not AvailableNegative4660753 - 466193143185.7
transcriptional regulator, tetr familySAMN06295920_11353Not AvailablePositive4662221 - 466290425482.4

Displaying genes 4471 – 4480 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.