Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylpropionate dioxygenase, large terminal subunit | SAMN06295920_11324 | Not Available | Positive | 4627396 - 4628403 | 37193.3 |
| hypothetical protein | SAMN06295920_11325 | Not Available | Positive | 4628430 - 4629059 | 23480.2 |
| transcriptional regulator, gntr family | SAMN06295920_11326 | Not Available | Positive | 4629142 - 4629912 | 28426.9 |
| transcriptional regulator, xre family with cupin sensor | SAMN06295920_11327 | Not Available | Negative | 4629915 - 4630478 | 20674.8 |
| ferredoxin-nadp reductase | SAMN06295920_11328 | Not Available | Positive | 4630719 - 4632431 | 62233.1 |
| 2-dehydro-3-deoxygluconokinase | SAMN06295920_11329 | Not Available | Negative | 4632447 - 4633484 | 36296.6 |
| short-chain dehydrogenase | SAMN06295920_11330 | Not Available | Negative | 4633465 - 4634358 | 31607.7 |
| uncharacterized membrane protein | SAMN06295920_11331 | Not Available | Negative | 4634355 - 4635485 | 39735.0 |
| phytoene dehydrogenase-related protein | SAMN06295920_11332 | Not Available | Positive | 4635644 - 4637218 | 57894.0 |
| predicted amidohydrolase | SAMN06295920_11333 | Not Available | Positive | 4637238 - 4638392 | 43126.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.