Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_11264 | Not Available | Positive | 4557635 - 4558813 | 40766.5 |
| anti-sigma b factor antagonist | SAMN06295920_11265 | Not Available | Negative | 4558854 - 4559186 | 11163.4 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN06295920_11266 | Not Available | Positive | 4559305 - 4559703 | 14086.9 |
| set domain-containing protein | SAMN06295920_11267 | Not Available | Positive | 4559749 - 4560216 | 16871.9 |
| diaminopimelate decarboxylase | SAMN06295920_11268 | Not Available | Positive | 4560206 - 4561411 | 43480.6 |
| periplasmic sensor diguanylate cyclase/phosphodiesterase | SAMN06295920_11269 | Not Available | Negative | 4561400 - 4563628 | 82085.6 |
| hypothetical protein | SAMN06295920_11270 | Not Available | Negative | 4563742 - 4563915 | 6312.44 |
| dienelactone hydrolase | SAMN06295920_11271 | Not Available | Negative | 4563921 - 4564649 | 26095.2 |
| zinc transporter | SAMN06295920_11272 | Not Available | Negative | 4564842 - 4565837 | 37030.4 |
| hypothetical protein | SAMN06295920_11273 | Not Available | Positive | 4565991 - 4567394 | 48295.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.