Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione s-transferaseSAMN06295920_101314Not AvailableNegative331354 - 33193221392.7
udp-2,3-diacylglucosamine pyrophosphatase lpxhSAMN06295920_101315Not AvailablePositive332168 - 33301932486.8
glycosyltransferase involved in cell wall bisynthesisSAMN06295920_101316Not AvailablePositive333021 - 33404936470.7
hypothetical proteinSAMN06295920_101317Not AvailablePositive334192 - 33486924754.4
exodeoxyribonuclease vii small subunitSAMN06295920_101318Not AvailablePositive334903 - 3351849939.84
farnesyl diphosphate synthaseSAMN06295920_101319Not AvailablePositive335192 - 33608531378.3
phosphopantetheine adenylyltransferaseSAMN06295920_101320Not AvailablePositive336110 - 33660718149.3
peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin familySAMN06295920_101321Not AvailablePositive336696 - 33760731628.1
s-adenosylmethionine:trna ribosyltransferase-isomeraseSAMN06295920_101322Not AvailablePositive337617 - 33865137433.7
predicted lipoproteinSAMN06295920_101323Not AvailableNegative338661 - 33965636433.4

Displaying genes 431 – 440 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.