Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fdhd proteinSAMN06295920_11244Not AvailableNegative4533140 - 453392527747.4
formate dehydrogenase subunit deltaSAMN06295920_11245Not AvailableNegative4533927 - 45341578353.03
formate dehydrogenase alpha subunitSAMN06295920_11246Not AvailableNegative4534154 - 4536997103119.0
formate dehydrogenase beta subunitSAMN06295920_11247Not AvailableNegative4537002 - 453854953797.7
formate dehydrogenase gamma subunitSAMN06295920_11248Not AvailableNegative4538546 - 453902516884.4
dna-binding transcriptional regulator, lysr familySAMN06295920_11249Not AvailableNegative4539095 - 453999732190.2
adenylate cyclaseSAMN06295920_11250Not AvailablePositive4540202 - 454291399433.8
predicted kinase, aminoglycoside phosphotransferase (apt) familySAMN06295920_11251Not AvailableNegative4542922 - 454398338808.1
acyl-coa dehydrogenaseSAMN06295920_11252Not AvailableNegative4543980 - 454514341962.8
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_11253Not AvailableNegative4545157 - 454591225973.2

Displaying genes 4371 – 4380 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.