Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-deoxy-d-xylulose-5-phosphate synthaseSAMN06295920_11234Not AvailableNegative4519445 - 452136467861.3
fur family transcriptional regulator, zinc uptake regulatorSAMN06295920_11235Not AvailableNegative4521412 - 452188816820.6
merc mercury resistance proteinSAMN06295920_11236Not AvailableNegative4521927 - 452230412992.5
two-component system, ompr family, kdp operon response regulator kdpeSAMN06295920_11237Not AvailableNegative4522386 - 452305424367.5
two-component system, ompr family, sensor histidine kinase kdpdSAMN06295920_11238Not AvailableNegative4523051 - 452561291918.6
k+-transporting atpase atpase c chainSAMN06295920_11239Not AvailableNegative4525735 - 452630419568.6
k+-transporting atpase atpase b chainSAMN06295920_11240Not AvailableNegative4526473 - 452856672588.8
k+-transporting atpase atpase a chainSAMN06295920_11241Not AvailableNegative4528600 - 453030359548.7
acyl-coa dehydrogenaseSAMN06295920_11242Not AvailableNegative4530785 - 453250060113.2
molybdenum cofactor guanylyltransferaseSAMN06295920_11243Not AvailableNegative4532598 - 453314318925.7

Displaying genes 4361 – 4370 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.