Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 4511842 - 4511918 | Not Available |
| protein translocase subunit yajc | SAMN06295920_11225 | Not Available | Positive | 4512119 - 4512388 | 9643.0 |
| preprotein translocase subunit secd | SAMN06295920_11226 | Not Available | Positive | 4512396 - 4513991 | 56988.8 |
| protein translocase subunit secf | SAMN06295920_11227 | Not Available | Positive | 4514006 - 4514971 | 34776.9 |
| uncharacterized conserved protein, contains mth938-like domain | SAMN06295920_11228 | Not Available | Positive | 4514971 - 4515348 | 13401.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06295920_11229 | Not Available | Negative | 4515456 - 4516634 | 41457.3 |
| beta-barrel assembly machine subunit bamd | SAMN06295920_11230 | Not Available | Positive | 4516726 - 4517511 | 29865.6 |
| flagellar motor switch protein flim | SAMN06295920_11231 | Not Available | Positive | 4517738 - 4518685 | 35293.5 |
| flagellar motor switch protein flin/fliy | SAMN06295920_11232 | Not Available | Positive | 4518682 - 4519005 | 11366.8 |
| flagellar protein flio/fliz | SAMN06295920_11233 | Not Available | Positive | 4519002 - 4519289 | 10404.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.