Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN06295920_111172 | Not Available | Positive | 4452670 - 4454004 | 46813.6 |
| uncharacterized conserved protein glcg, duf336 family | SAMN06295920_111173 | Not Available | Positive | 4454030 - 4454512 | 16007.2 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN06295920_111174 | Not Available | Positive | 4454455 - 4455249 | 28099.0 |
| 4-carboxymuconolactone decarboxylase | SAMN06295920_111175 | Not Available | Negative | 4455285 - 4455674 | 14193.0 |
| acetyl esterase | SAMN06295920_111176 | Not Available | Negative | 4455683 - 4456618 | 33018.8 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | SAMN06295920_111177 | Not Available | Negative | 4456621 - 4457829 | 44900.6 |
| 4-hydroxy-2-oxoheptanedioate aldolase | SAMN06295920_111178 | Not Available | Positive | 4458000 - 4458770 | 27443.8 |
| 4-carboxymuconolactone decarboxylase | SAMN06295920_111179 | Not Available | Positive | 4458790 - 4459128 | 12142.6 |
| mfs transporter, aahs family, 4-hydroxybenzoate transporter | SAMN06295920_111180 | Not Available | Positive | 4459165 - 4460529 | 48050.9 |
| dna-binding transcriptional regulator, marr family | SAMN06295920_111181 | Not Available | Negative | 4460605 - 4461129 | 19502.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.