Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | SAMN06295920_101304 | Not Available | Negative | 322304 - 322867 | 20630.2 |
| hypothetical protein | SAMN06295920_101305 | Not Available | Positive | 322963 - 323100 | 4918.26 |
| hypothetical protein | SAMN06295920_101306 | Not Available | Positive | 323081 - 324895 | 63159.8 |
| integrase/recombinase xerd | SAMN06295920_101307 | Not Available | Positive | 325050 - 325982 | 33822.8 |
| peptidase propeptide and ypeb domain-containing protein | SAMN06295920_101308 | Not Available | Positive | 326005 - 326271 | 9450.17 |
| predicted arabinose efflux permease, mfs family | SAMN06295920_101309 | Not Available | Positive | 326352 - 327935 | 56673.3 |
| alanine racemase | SAMN06295920_101310 | Not Available | Positive | 327964 - 329010 | 37226.6 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN06295920_101311 | Not Available | Positive | 329012 - 329806 | 28007.9 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN06295920_101312 | Not Available | Positive | 329806 - 330564 | 27530.6 |
| peroxiredoxin | SAMN06295920_101313 | Not Available | Positive | 330676 - 331230 | 20684.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.