Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trans-feruloyl-coa hydratase / vanillin synthaseSAMN06295920_111162Not AvailableNegative4438981 - 443984732116.5
acyl-coa synthetase (ndp forming)SAMN06295920_111163Not AvailableNegative4439867 - 444204774512.3
hypothetical proteinSAMN06295920_111164Not AvailablePositive4442269 - 444318933397.0
hypothetical proteinSAMN06295920_111165Not AvailablePositive4443186 - 444410633030.1
acyl-coa reductaseSAMN06295920_111166Not AvailablePositive4444124 - 444554250528.6
5,10-methylenetetrahydrofolate dehydrogenase (nadp+)SAMN06295920_111167Not AvailablePositive4445571 - 444647631518.7
predicted metal-dependent hydrolase, tim-barrel foldSAMN06295920_111168Not AvailableNegative4446464 - 444726429563.4
predicted metal-dependent hydrolase, tim-barrel foldSAMN06295920_111169Not AvailableNegative4447261 - 444815732289.3
predicted arabinose efflux permease, mfs familySAMN06295920_111170Not AvailableNegative4448135 - 444944245170.1
tonb-dependent receptor plug domainSAMN06295920_111171Not AvailablePositive4449763 - 4452600101964.0

Displaying genes 4281 – 4290 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.