Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN06295920_111152Not AvailableNegative4427528 - 442866141604.8
dna-binding transcriptional regulator, csgd familySAMN06295920_111153Not AvailableNegative4428954 - 443010541434.2
glutaconate coa-transferase subunit aSAMN06295920_111154Not AvailablePositive4430278 - 443116231828.3
glutaconate coa-transferase subunit bSAMN06295920_111155Not AvailablePositive4431165 - 443195929140.8
acyl-coa synthetase (amp-forming)/amp-acid ligase iiSAMN06295920_111156Not AvailableNegative4432112 - 443356651180.0
amidohydrolaseSAMN06295920_111157Not AvailableNegative4433571 - 443475844710.5
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseSAMN06295920_111158Not AvailableNegative4434859 - 443563826851.4
enoyl-coa hydrataseSAMN06295920_111159Not AvailableNegative4435638 - 443645329552.3
acyl-coa dehydrogenaseSAMN06295920_111160Not AvailablePositive4436582 - 443865773497.3
4-carboxymuconolactone decarboxylaseSAMN06295920_111161Not AvailableNegative4438658 - 443898412012.4

Displaying genes 4271 – 4280 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.