Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative abc transport system atp-binding proteinSAMN06295920_11172Not AvailablePositive4344232 - 434496026323.6
putative abc transport system permease proteinSAMN06295920_11173Not AvailablePositive4344960 - 434616843482.3
ef handSAMN06295920_11174Not AvailablePositive4346165 - 434686025220.8
two-component system, ompr family, response regulatorSAMN06295920_11175Not AvailablePositive4346857 - 434756425773.1
signal transduction histidine kinaseSAMN06295920_11176Not AvailablePositive4347561 - 434899152142.5
branched-chain alpha-keto acid dehydrogenase e1 componentSAMN06295920_11177Not AvailablePositive4349187 - 435044646381.8
hypothetical proteinSAMN06295920_11178Not AvailablePositive4350443 - 43505623846.61
branched-chain alpha-keto acid dehydrogenase e1 componentSAMN06295920_11179Not AvailablePositive4350559 - 435158437395.7
branched-chain alpha-keto acid dehydrogenase e2 componentSAMN06295920_11180Not AvailablePositive4351591 - 435291946533.8
dna-binding regulatory protein, yebc/pmpr familySAMN06295920_11181Not AvailablePositive4352993 - 435373626377.0

Displaying genes 4191 – 4200 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.