Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseSAMN06295920_101294Not AvailableNegative312022 - 31275327201.6
dna-(apurinic or apyrimidinic site) lyaseSAMN06295920_101295Not AvailablePositive312999 - 31381129914.3
ssu ribosomal protein s20pSAMN06295920_101296Not AvailablePositive313919 - 3141829413.52
chromosomal replication initiator protein dnaaSAMN06295920_101297Not AvailablePositive314587 - 31602952909.8
nifu homolog involved in fe-s cluster formationSAMN06295920_101298Not AvailablePositive316170 - 31665817055.4
kef-type potassium/proton antiporter, cpa2 familySAMN06295920_101299Not AvailablePositive316655 - 31844263079.0
uncharacterized membrane protein ygdd, tmem256/duf423 familySAMN06295920_101300Not AvailablePositive318429 - 31878211832.9
uncharacterized membrane protein yqik, contains band7/phb/spfh domainSAMN06295920_101301Not AvailableNegative318796 - 32051161869.7
protein of unknown functionSAMN06295920_101302Not AvailableNegative320508 - 32112521610.6
3-dehydroquinate synthaseSAMN06295920_101303Not AvailableNegative321198 - 32230738739.4

Displaying genes 411 – 420 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.