Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN06295920_11162 | Not Available | Positive | 4335078 - 4335428 | 12801.2 |
| uncharacterized conserved protein yece, duf72 family | SAMN06295920_11163 | Not Available | Positive | 4335428 - 4336225 | 29003.4 |
| luciferase family oxidoreductase, group 1 | SAMN06295920_11164 | Not Available | Negative | 4336377 - 4337411 | 37423.8 |
| hypothetical protein | SAMN06295920_11165 | Not Available | Negative | 4337479 - 4338144 | 24051.1 |
| peroxiredoxin | SAMN06295920_11166 | Not Available | Negative | 4338147 - 4338698 | 19184.4 |
| aspartyl protease | SAMN06295920_11167 | Not Available | Negative | 4338759 - 4339736 | 34727.3 |
| protein of unknown function | SAMN06295920_11168 | Not Available | Positive | 4339871 - 4340212 | 11477.5 |
| outer membrane protein ompa | SAMN06295920_11169 | Not Available | Positive | 4340235 - 4341077 | 29483.7 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295920_11170 | Not Available | Positive | 4341319 - 4342830 | 53203.6 |
| hlyd family secretion protein | SAMN06295920_11171 | Not Available | Positive | 4342830 - 4344242 | 48402.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.