Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper-resistance protein, copa family | SAMN06295920_11152 | Not Available | Positive | 4324421 - 4326112 | 61886.5 |
| copper resistance protein b | SAMN06295920_11153 | Not Available | Positive | 4326109 - 4327119 | 36700.2 |
| Trna-gly | Not Available | Not Available | Positive | 4327376 - 4327449 | Not Available |
| transcriptional regulator, badm/rrf2 family | SAMN06295920_11155 | Not Available | Positive | 4327534 - 4327992 | 16325.9 |
| trna (cmo5u34)-methyltransferase | SAMN06295920_11156 | Not Available | Positive | 4327985 - 4328683 | 25043.9 |
| 3-methylcrotonyl-coa carboxylase alpha subunit | SAMN06295920_11157 | Not Available | Negative | 4328687 - 4330555 | 65789.9 |
| 3-methylcrotonyl-coa carboxylase beta subunit | SAMN06295920_11158 | Not Available | Negative | 4330737 - 4332338 | 57094.4 |
| isovaleryl-coa dehydrogenase | SAMN06295920_11159 | Not Available | Negative | 4332490 - 4333641 | 41121.3 |
| dna-binding transcriptional regulator, lysr family | SAMN06295920_11160 | Not Available | Positive | 4333735 - 4334631 | 32562.4 |
| uncharacterized conserved protein ybaa, duf1428 family | SAMN06295920_11161 | Not Available | Positive | 4334707 - 4335060 | 13293.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.