Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quinol monooxygenase yginSAMN06295920_11112Not AvailableNegative4280226 - 428052211207.4
fatty-acyl-coa synthaseSAMN06295920_11113Not AvailableNegative4280519 - 428215658465.6
autoinducer 2-degrading proteinSAMN06295920_11114Not AvailableNegative4282153 - 428244911352.5
iron complex outermembrane recepter proteinSAMN06295920_11115Not AvailablePositive4282706 - 428518389665.4
hypothetical proteinSAMN06295920_11116Not AvailableNegative4285233 - 428579019923.7
glyoxalase/bleomycin resistance protein/dioxygenase superfamily proteinSAMN06295920_11117Not AvailableNegative4285862 - 428639519236.0
phenylpropionate dioxygenase, large terminal subunitSAMN06295920_11118Not AvailablePositive4286499 - 428785450644.3
phenylpropionate dioxygenase, large terminal subunitSAMN06295920_11119Not AvailablePositive4287851 - 428919750175.0
3(or 17)beta-hydroxysteroid dehydrogenaseSAMN06295920_11120Not AvailableNegative4289394 - 429016726702.3
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_11121Not AvailableNegative4290194 - 429112032844.1

Displaying genes 4131 – 4140 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.