Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, marr familySAMN06295920_110208Not AvailablePositive4258486 - 425897118020.7
benzoate-coa ligaseSAMN06295920_110209Not AvailablePositive4259118 - 426065655084.7
3-hydroxyacyl-coa dehydrogenaseSAMN06295920_110210Not AvailablePositive4260686 - 426271972355.4
anthraniloyl-coa monooxygenaseSAMN06295920_110211Not AvailablePositive4262798 - 426511385761.7
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_110212Not AvailablePositive4265110 - 426587125904.2
enoyl-coa hydrataseSAMN06295920_110213Not AvailablePositive4265887 - 426669928818.7
acyl-coa dehydrogenaseSAMN06295920_110214Not AvailablePositive4266701 - 426788242014.1
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN06295920_110215Not AvailablePositive4267879 - 426827114830.1
acyl-coa dehydrogenase, n-terminal domainSAMN06295920_110216Not AvailablePositive4268295 - 426867114382.9
outer membrane protein ompaSAMN06295920_1111Not AvailablePositive4268893 - 427001739512.6

Displaying genes 4111 – 4120 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.