Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, marr familySAMN06295920_110198Not AvailablePositive4247228 - 424768616920.6
iron complex outermembrane recepter proteinSAMN06295920_110199Not AvailablePositive4247927 - 425016481198.5
hypothetical proteinSAMN06295920_110200Not AvailablePositive4250256 - 425053110048.0
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_110201Not AvailableNegative4250557 - 425136327756.7
gluconate 5-dehydrogenaseSAMN06295920_110202Not AvailableNegative4251382 - 425215826359.7
glyoxalase/bleomycin resistance protein/dioxygenase superfamily proteinSAMN06295920_110203Not AvailableNegative4252142 - 425260616807.0
cytochrome p450SAMN06295920_110204Not AvailableNegative4252603 - 425382045769.5
sugar phosphate permeaseSAMN06295920_110205Not AvailableNegative4253817 - 425505543736.5
iron complex outermembrane recepter proteinSAMN06295920_110206Not AvailableNegative4255117 - 425748385318.8
transcriptional regulator, tetr familySAMN06295920_110207Not AvailableNegative4257591 - 425837329086.3

Displaying genes 4101 – 4110 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.