Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein cpabSAMN06295920_101284Not AvailableNegative303629 - 30463334427.5
prepilin peptidase cpaaSAMN06295920_101285Not AvailableNegative304702 - 30517516928.7
d-arginine dehydrogenaseSAMN06295920_101286Not AvailablePositive305224 - 30632438325.7
methyltransferase domain-containing proteinSAMN06295920_101287Not AvailableNegative306321 - 30721433726.9
predicted nuclease of the rnase h fold, hicb familySAMN06295920_101288Not AvailablePositive307399 - 30770411127.3
predicted peroxiredoxinSAMN06295920_101289Not AvailableNegative307708 - 30807612566.4
adenylyltransferase and sulfurtransferaseSAMN06295920_101290Not AvailableNegative308058 - 30880725861.0
dutp pyrophosphataseSAMN06295920_101291Not AvailableNegative308835 - 30928415397.4
phosphopantothenate-cysteine ligase /phosphopantothenoylcysteine decarboxylaseSAMN06295920_101292Not AvailableNegative309271 - 31048842667.8
2-octaprenylphenol hydroxylaseSAMN06295920_101293Not AvailableNegative310493 - 31202555693.8

Displaying genes 401 – 410 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.