Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN06295920_11088Not AvailablePositive4123580 - 412419722276.6
fatty-acyl-coa synthaseSAMN06295920_11089Not AvailableNegative4124292 - 412595359820.6
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_11090Not AvailablePositive4126223 - 412700226826.0
transcriptional regulator, laci familySAMN06295920_11091Not AvailableNegative4127015 - 412807938360.3
glyoxylase, beta-lactamase superfamily iiSAMN06295920_11092Not AvailableNegative4128101 - 412900032686.9
hydroxymethylglutaryl-coa lyaseSAMN06295920_11093Not AvailableNegative4129065 - 412997332240.7
enoyl-coa hydratase/carnithine racemaseSAMN06295920_11094Not AvailableNegative4129989 - 413077728250.1
crotonobetainyl-coa:carnitine coa-transferase caibSAMN06295920_11095Not AvailableNegative4130774 - 413193140656.4
hypothetical proteinSAMN06295920_11096Not AvailableNegative4131928 - 41320383777.84
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN06295920_11097Not AvailableNegative4132133 - 413299030079.9

Displaying genes 3991 – 4000 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.