Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycyl-trna synthetase alpha chainSAMN06295920_101274Not AvailablePositive290374 - 29124932925.8
glycyl-trna synthetase beta chainSAMN06295920_101275Not AvailablePositive291252 - 29328572696.6
pyruvate phosphate dikinaseSAMN06295920_101276Not AvailablePositive293342 - 29601196074.0
uncharacterized proteinSAMN06295920_101277Not AvailablePositive296176 - 29733943373.1
predicted 5' dna nuclease, flap endonuclease-1-like, helix-3-turn-helix (h3th) domainSAMN06295920_101278Not AvailableNegative297455 - 29802721464.3
tight adherence protein cSAMN06295920_101279Not AvailableNegative298130 - 29912236317.3
tight adherence protein bSAMN06295920_101280Not AvailableNegative299130 - 30010435704.7
pilus assembly protein cpaeSAMN06295920_101281Not AvailableNegative300127 - 30139545105.2
pilus assembly protein cpadSAMN06295920_101282Not AvailableNegative301395 - 30202721870.4
pilus assembly protein cpacSAMN06295920_101283Not AvailableNegative302047 - 30362753980.9

Displaying genes 391 – 400 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.