Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing proteinSAMN06295920_11068Not AvailablePositive4101888 - 410428186392.0
pimeloyl-acp methyl ester carboxylesteraseSAMN06295920_11069Not AvailableNegative4104203 - 410496727898.1
3-oxoadipate enol-lactonaseSAMN06295920_11070Not AvailableNegative4104964 - 410573127434.8
chrr cupin-like domain-containing proteinSAMN06295920_11071Not AvailablePositive4105853 - 410663528416.9
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN06295920_11072Not AvailableNegative4106644 - 410767837502.6
dna-binding transcriptional regulator, csgd familySAMN06295920_11073Not AvailableNegative4107750 - 410868534856.0
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN06295920_11074Not AvailablePositive4108953 - 411000239044.6
5-(hydroxymethyl)furfural/furfural oxidaseSAMN06295920_11075Not AvailablePositive4109992 - 411164158261.2
mfs transporter, aahs family, 4-hydroxybenzoate transporterSAMN06295920_11076Not AvailablePositive4111647 - 411300246877.3
prolyl oligopeptidase family proteinSAMN06295920_11077Not AvailablePositive4112999 - 411377227821.6

Displaying genes 3971 – 3980 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.