Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN06295920_11018 | Not Available | Positive | 4040336 - 4041268 | 34870.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN06295920_11019 | Not Available | Positive | 4041372 - 4043738 | 85097.8 |
| cytochrome p450 | SAMN06295920_11020 | Not Available | Positive | 4043750 - 4044931 | 43352.7 |
| polysaccharide deacetylase | SAMN06295920_11021 | Not Available | Positive | 4044928 - 4045731 | 29270.8 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN06295920_11022 | Not Available | Negative | 4045812 - 4046774 | 33299.6 |
| dna-directed rna polymerase subunit beta | SAMN06295920_11023 | Not Available | Positive | 4047219 - 4051583 | 160818.0 |
| dna-directed rna polymerase subunit beta' | SAMN06295920_11024 | Not Available | Positive | 4051661 - 4055932 | 157395.0 |
| hypothetical protein | SAMN06295920_11025 | Not Available | Positive | 4056403 - 4056753 | 12154.6 |
| diguanylate cyclase | SAMN06295920_11026 | Not Available | Negative | 4056848 - 4058023 | 42432.2 |
| Trna-asp | Not Available | Not Available | Positive | 4058290 - 4058366 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.