Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like enzyme, putative cysteine protease | SAMN06295920_1108 | Not Available | Positive | 4030483 - 4031346 | 30945.9 |
| hypothetical protein | SAMN06295920_1109 | Not Available | Positive | 4031466 - 4031696 | 8431.97 |
| hypothetical protein | SAMN06295920_11010 | Not Available | Negative | 4031907 - 4032161 | 9524.43 |
| hypothetical protein | SAMN06295920_11011 | Not Available | Negative | 4032158 - 4032427 | 9755.71 |
| response regulator receiver domain-containing protein | SAMN06295920_11012 | Not Available | Positive | 4033519 - 4033899 | 14022.0 |
| pas domain s-box-containing protein | SAMN06295920_11013 | Not Available | Positive | 4034090 - 4036378 | 85227.6 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN06295920_11014 | Not Available | Positive | 4036371 - 4036742 | 13080.9 |
| putative membrane protein | SAMN06295920_11015 | Not Available | Positive | 4036863 - 4037312 | 16194.7 |
| di-and tricarboxylate transporter | SAMN06295920_11016 | Not Available | Positive | 4037338 - 4039113 | 62108.1 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN06295920_11017 | Not Available | Positive | 4039350 - 4040195 | 30629.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.