Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane receptor proteins, mostly fe transportSAMN06295920_109125Not AvailablePositive3918389 - 392066580116.5
predicted metalloprotease, contains c-terminal pdz domainSAMN06295920_109126Not AvailablePositive3920761 - 392253363258.6
uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein familySAMN06295920_109127Not AvailableNegative3922607 - 39228739101.66
hypothetical proteinSAMN06295920_109128Not AvailablePositive3923048 - 39232939120.07
Trna-tyrNot AvailableNot AvailablePositive3923359 - 3923444Not Available
23s rrna (guanosine2251-2'-o)-methyltransferaseSAMN06295920_109130Not AvailablePositive3923570 - 392431326484.7
ferredoxin, 2fe-2sSAMN06295920_109131Not AvailableNegative3924363 - 392468011347.3
dna-3-methyladenine glycosylase iiSAMN06295920_109132Not AvailablePositive3924762 - 392540623108.7
phenylalanyl-trna synthetase beta subunitSAMN06295920_109133Not AvailableNegative3925435 - 392781383410.0
phenylalanyl-trna synthetase, alpha subunitSAMN06295920_109134Not AvailableNegative3927810 - 392893441092.0

Displaying genes 3801 – 3810 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.