Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
choline dehydrogenaseSAMN06295920_10995Not AvailableNegative3881847 - 388348759263.1
cbs domain-containing proteinSAMN06295920_10996Not AvailablePositive3883704 - 388459732669.1
glucose/arabinose dehydrogenase, beta-propeller foldSAMN06295920_10997Not AvailablePositive3884701 - 388605047689.6
arginine-trna-protein transferaseSAMN06295920_10998Not AvailableNegative3886162 - 388696229614.4
l-threonine ammonia-lyaseSAMN06295920_10999Not AvailableNegative3887309 - 388855644347.7
3-hydroxyisobutyrate dehydrogenaseSAMN06295920_109100Not AvailablePositive3888629 - 388949830164.9
hypothetical proteinSAMN06295920_109101Not AvailablePositive3889495 - 389118959842.6
predicted pyrophosphatase or phosphodiesterase, alkp superfamilySAMN06295920_109102Not AvailablePositive3891239 - 389289458226.2
right handed beta helix regionSAMN06295920_109103Not AvailableNegative3892898 - 389396538137.6
methionine synthase (b12-dependent)SAMN06295920_109104Not AvailableNegative3894048 - 389664594805.4

Displaying genes 3771 – 3780 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.