Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hemolysin | SAMN06295920_10925 | Not Available | Negative | 3809876 - 3811216 | 48013.6 |
| outer membrane protein ompa | SAMN06295920_10926 | Not Available | Positive | 3811329 - 3811997 | 23043.3 |
| pp_03667 | SAMN06295920_10927 | Not Available | Negative | 3812001 - 3812453 | Not Available |
| uncharacterized membrane protein yqae, homolog of blt101, upf0057 family | SAMN06295920_10928 | Not Available | Negative | 3812646 - 3812858 | 7796.08 |
| hypothetical protein | SAMN06295920_10929 | Not Available | Negative | 3812855 - 3813175 | 11292.6 |
| lsu ribosomal protein l28p | SAMN06295920_10930 | Not Available | Positive | 3813327 - 3813617 | 10625.9 |
| hypothetical protein | SAMN06295920_10931 | Not Available | Negative | 3813849 - 3814796 | 34310.3 |
| glycine zipper 2tm domain-containing protein | SAMN06295920_10932 | Not Available | Positive | 3815011 - 3815400 | 14001.4 |
| cobaltochelatase cobt subunit | SAMN06295920_10933 | Not Available | Negative | 3815788 - 3817626 | 68181.4 |
| protein-tyrosine phosphatase | SAMN06295920_10934 | Not Available | Negative | 3817626 - 3818390 | 27786.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.