Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gluconate 5-dehydrogenaseSAMN06295920_10915Not AvailablePositive3799787 - 380057527105.6
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_10916Not AvailablePositive3800601 - 380148530433.6
aminocarboxymuconate-semialdehyde decarboxylaseSAMN06295920_10917Not AvailableNegative3801648 - 380271238353.9
protein of unknown functionSAMN06295920_10918Not AvailableNegative3802724 - 380311014284.0
vanillate o-demethylase monooxygenase subunitSAMN06295920_10919Not AvailablePositive3803324 - 380441239727.8
catechol-2,3-dioxygenaseSAMN06295920_10920Not AvailablePositive3804393 - 380539737357.4
3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenaseSAMN06295920_10921Not AvailablePositive3805593 - 380677441917.9
aminocarboxymuconate-semialdehyde decarboxylaseSAMN06295920_10922Not AvailableNegative3807068 - 380812637725.2
uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domainsSAMN06295920_10923Not AvailablePositive3808325 - 380919431298.7
dna-binding protein hu-betaSAMN06295920_10924Not AvailableNegative3809400 - 38096759209.07

Displaying genes 3691 – 3700 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.