Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-alanine-dl-glutamate epimeraseSAMN06295920_108232Not AvailableNegative3776454 - 377745235213.3
hypothetical proteinSAMN06295920_108233Not AvailableNegative3777452 - 377898455087.1
poly(3-hydroxybutyrate) depolymeraseSAMN06295920_108234Not AvailableNegative3778974 - 378019445447.7
atp-binding cassette, subfamily bSAMN06295920_108235Not AvailablePositive3780310 - 378208863465.3
3-hydroxyisobutyrate dehydrogenaseSAMN06295920_108236Not AvailableNegative3782125 - 378301529470.3
enoyl-coa hydratase/isomeraseSAMN06295920_108237Not AvailableNegative3783021 - 37831976297.55
hypothetical proteinSAMN06295920_1091Not AvailablePositive3783198 - 37833415415.38
transcriptional regulator, gntr familySAMN06295920_1092Not AvailablePositive3783390 - 378405825361.3
nadph:quinone reductaseSAMN06295920_1093Not AvailableNegative3784194 - 378515033072.3
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN06295920_1094Not AvailableNegative3785188 - 378608431641.0

Displaying genes 3671 – 3680 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.