Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
homoserine o-succinyltransferaseSAMN06295920_108171Not AvailableNegative3714442 - 371539535488.2
3',5'-cyclic amp phosphodiesterase cpdaSAMN06295920_108173Not AvailableNegative3715587 - 371645631761.2
doubled cxxch domain-containing proteinSAMN06295920_108174Not AvailableNegative3716586 - 371840965086.1
hypothetical proteinSAMN06295920_108175Not AvailableNegative3718420 - 371929832452.9
fe-s-cluster-containing hydrogenase component 2SAMN06295920_108176Not AvailableNegative3719298 - 372175188809.2
cytochrome c-type biogenesis protein ccmhSAMN06295920_108177Not AvailablePositive3721945 - 372292234129.5
atp-dependent clp protease atp-binding subunit clpxSAMN06295920_108178Not AvailableNegative3723094 - 372436545970.6
atp-dependent clp protease proteolytic subunit clppSAMN06295920_108179Not AvailableNegative3724650 - 372530624042.0
trigger factorSAMN06295920_108180Not AvailableNegative3725556 - 372721159642.5
Trna-leuNot AvailableNot AvailablePositive3727281 - 3727365Not Available

Displaying genes 3611 – 3620 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.