Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small-conductance mechanosensitive channel | SAMN06295920_101234 | Not Available | Negative | 248375 - 249574 | 43094.6 |
| probable o-glycosylation ligase, exosortase a-associated | SAMN06295920_101235 | Not Available | Negative | 249586 - 251046 | 54311.8 |
| hypothetical protein | SAMN06295920_101236 | Not Available | Negative | 251039 - 251236 | 7071.64 |
| pep-cterm/exosortase a-associated glycosyltransferase, daro_2409 family | SAMN06295920_101237 | Not Available | Positive | 251299 - 252504 | 43779.9 |
| hypothetical protein | SAMN06295920_101238 | Not Available | Positive | 252641 - 254020 | 47980.7 |
| hypothetical protein | SAMN06295920_101239 | Not Available | Negative | 254010 - 254336 | 11896.4 |
| hypothetical protein | SAMN06295920_101240 | Not Available | Negative | 254333 - 254527 | 7403.97 |
| phage repressor protein c, contains cro/c1-type hth and peptisase s24 domains | SAMN06295920_101241 | Not Available | Positive | 254616 - 255266 | 23556.3 |
| hypothetical protein | SAMN06295920_101242 | Not Available | Negative | 255271 - 255450 | 6049.53 |
| hypothetical protein | SAMN06295920_101243 | Not Available | Positive | 255643 - 255855 | 8119.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.