Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa reductase | SAMN06295920_10871 | Not Available | Negative | 3597411 - 3598886 | 51756.2 |
| arylsulfatase | SAMN06295920_10872 | Not Available | Negative | 3598890 - 3601226 | 84665.9 |
| gluconate 5-dehydrogenase | SAMN06295920_10873 | Not Available | Negative | 3601235 - 3602035 | 27691.3 |
| choline dehydrogenase | SAMN06295920_10874 | Not Available | Positive | 3602206 - 3603891 | 60615.4 |
| hypothetical protein | SAMN06295920_10875 | Not Available | Positive | 3604242 - 3604502 | 8728.49 |
| l,d-transpeptidase catalytic domain | SAMN06295920_10876 | Not Available | Positive | 3604520 - 3605878 | 49777.9 |
| dna mismatch repair protein mutl | SAMN06295920_10877 | Not Available | Negative | 3605883 - 3607667 | 63677.4 |
| rod shape-determining protein mreb | SAMN06295920_10878 | Not Available | Positive | 3607795 - 3608835 | 36726.6 |
| rod shape-determining protein mrec | SAMN06295920_10879 | Not Available | Positive | 3608852 - 3609727 | 30380.0 |
| rod shape-determining protein mred | SAMN06295920_10880 | Not Available | Positive | 3609724 - 3610236 | 18588.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.