Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, sensor histidine kinase chvg | SAMN06295920_10851 | Not Available | Positive | 3579216 - 3580805 | 58115.6 |
| hpr(ser) kinase/phosphatase | SAMN06295920_10852 | Not Available | Positive | 3580809 - 3581258 | 15362.7 |
| upf0042 nucleotide-binding protein | SAMN06295920_10853 | Not Available | Positive | 3581255 - 3582181 | 34279.6 |
| pts system, mannose-specific iia component | SAMN06295920_10854 | Not Available | Positive | 3582201 - 3582608 | 14081.4 |
| phosphocarrier protein | SAMN06295920_10855 | Not Available | Positive | 3582605 - 3582877 | 9348.27 |
| spou rrna methylase family protein | SAMN06295920_10856 | Not Available | Positive | 3583270 - 3583782 | 18377.1 |
| transcription elongation factor greb | SAMN06295920_10857 | Not Available | Positive | 3583779 - 3584270 | 17823.1 |
| dna-binding transcriptional regulator, csgd family | SAMN06295920_10858 | Not Available | Positive | 3584394 - 3584933 | 19600.7 |
| hypothetical protein | SAMN06295920_10859 | Not Available | Positive | 3584985 - 3585332 | 12545.0 |
| hypothetical protein | SAMN06295920_10860 | Not Available | Positive | 3585385 - 3585813 | 15776.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.