Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c553 | SAMN06295920_101224 | Not Available | Positive | 235572 - 236210 | 21465.6 |
| choline dehydrogenase | SAMN06295920_101225 | Not Available | Positive | 236233 - 237837 | 57811.6 |
| predicted arabinose efflux permease, mfs family | SAMN06295920_101226 | Not Available | Positive | 237834 - 239105 | 44607.4 |
| hypothetical protein | SAMN06295920_101227 | Not Available | Positive | 239209 - 239520 | 11216.5 |
| serine/threonine protein phosphatase 1 | SAMN06295920_101228 | Not Available | Negative | 239530 - 240303 | 28377.7 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN06295920_101229 | Not Available | Negative | 240405 - 241685 | 48111.0 |
| o-antigen ligase | SAMN06295920_101230 | Not Available | Positive | 242746 - 244122 | 48706.6 |
| polysaccharide export outer membrane protein | SAMN06295920_101231 | Not Available | Positive | 244200 - 244892 | 24764.1 |
| capsular exopolysaccharide family | SAMN06295920_101232 | Not Available | Positive | 244931 - 247150 | 79908.0 |
| hypothetical protein | SAMN06295920_101233 | Not Available | Positive | 247163 - 248362 | 42787.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.