Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_1081 | Not Available | Positive | 3530898 - 3531521 | 20793.0 |
| hypothetical protein | SAMN06295920_1082 | Not Available | Positive | 3531570 - 3532265 | 25115.6 |
| hypothetical protein | SAMN06295920_1083 | Not Available | Positive | 3532262 - 3532693 | 14225.9 |
| phospholipid transport system substrate-binding protein | SAMN06295920_1084 | Not Available | Positive | 3532808 - 3533404 | 21014.5 |
| protein of unknown function | SAMN06295920_1085 | Not Available | Positive | 3533540 - 3533755 | 8077.62 |
| membrane associated serine protease, rhomboid family | SAMN06295920_1086 | Not Available | Negative | 3533877 - 3534506 | 21764.4 |
| transcription elongation factor grea | SAMN06295920_1087 | Not Available | Negative | 3534524 - 3535000 | 17372.7 |
| carbamoyl-phosphate synthase large subunit | SAMN06295920_1088 | Not Available | Negative | 3535084 - 3538416 | 120066.0 |
| hypothetical protein | SAMN06295920_1089 | Not Available | Negative | 3538416 - 3538778 | 13211.2 |
| carbamoyl-phosphate synthase small subunit | SAMN06295920_10810 | Not Available | Negative | 3538775 - 3539953 | 41838.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.