Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN06295920_101214 | Not Available | Positive | 223128 - 224477 | 47040.4 |
| type iv secretory pathway, virj component | SAMN06295920_101215 | Not Available | Positive | 224550 - 226043 | 51937.5 |
| virulence protein (virj) | SAMN06295920_101216 | Not Available | Positive | 226040 - 226762 | 25486.4 |
| hypothetical protein | SAMN06295920_101217 | Not Available | Negative | 226820 - 227062 | 8334.09 |
| transcriptional regulator, arac family | SAMN06295920_101218 | Not Available | Positive | 227364 - 228377 | 38199.5 |
| outer membrane receptor proteins, mostly fe transport | SAMN06295920_101219 | Not Available | Positive | 228566 - 230887 | 84351.4 |
| predicted arabinose efflux permease, mfs family | SAMN06295920_101220 | Not Available | Positive | 230936 - 232117 | 39859.9 |
| phenylacetaldehyde dehydrogenase | SAMN06295920_101221 | Not Available | Positive | 232117 - 233622 | 52867.4 |
| fad/fmn-containing dehydrogenase | SAMN06295920_101222 | Not Available | Positive | 233636 - 235162 | 55691.1 |
| hypothetical protein | SAMN06295920_101223 | Not Available | Positive | 235174 - 235566 | 13681.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.