Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transporter | SAMN06295920_107213 | Not Available | Negative | 3457104 - 3458774 | 59059.2 |
| catechol 2,3-dioxygenase | SAMN06295920_107214 | Not Available | Negative | 3458842 - 3459285 | 15661.6 |
| snoal-like domain-containing protein | SAMN06295920_107215 | Not Available | Negative | 3459282 - 3459776 | 18492.9 |
| transcriptional regulator, crp/fnr family | SAMN06295920_107216 | Not Available | Negative | 3459870 - 3460598 | 25928.6 |
| transcriptional regulator, tetr family | SAMN06295920_107217 | Not Available | Positive | 3460759 - 3461973 | 44166.3 |
| glycine cleavage system regulatory protein | SAMN06295920_107218 | Not Available | Negative | 3462195 - 3462722 | 18211.7 |
| uncharacterized conserved protein, heparinase superfamily | SAMN06295920_107219 | Not Available | Negative | 3462804 - 3464531 | 62026.2 |
| ribulose-5-phosphate 3-epimerase | SAMN06295920_107220 | Not Available | Negative | 3464542 - 3465204 | 23198.1 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN06295920_107221 | Not Available | Negative | 3465270 - 3466538 | 44087.8 |
| heat shock protein. metallo peptidase. merops family m48b | SAMN06295920_107222 | Not Available | Negative | 3466636 - 3467589 | 33219.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.