Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two component transcriptional regulator, winged helix familySAMN06295920_107203Not AvailableNegative3444441 - 344519026862.4
membrane fusion protein, multidrug efflux systemSAMN06295920_107204Not AvailablePositive3445282 - 344642139966.2
multidrug efflux pumpSAMN06295920_107205Not AvailablePositive3446436 - 3449546110861.0
efflux transporter, outer membrane factor (omf) lipoprotein, nodt familySAMN06295920_107206Not AvailablePositive3449549 - 345099151501.4
uncharacterized protein yjbi, contains pentapeptide repeatsSAMN06295920_107207Not AvailableNegative3451011 - 345170325689.3
spermine/spermidine synthaseSAMN06295920_107208Not AvailablePositive3451802 - 345247623758.9
regulatory protein, luxr familySAMN06295920_107209Not AvailableNegative3452492 - 345343934538.1
hypothetical proteinSAMN06295920_107210Not AvailablePositive3453499 - 345469843475.1
acetolactate synthase-1/2/3 large subunitSAMN06295920_107211Not AvailablePositive3454779 - 345652161573.7
glyoxalase/bleomycin resistance protein/dioxygenase superfamily proteinSAMN06295920_107212Not AvailablePositive3456518 - 345709321513.0

Displaying genes 3361 – 3370 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.