Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
benzoate/toluate 1,2-dioxygenase beta subunitSAMN06295920_107193Not AvailablePositive3433755 - 343427019878.4
dihydroxycyclohexadiene carboxylate dehydrogenaseSAMN06295920_107194Not AvailablePositive3434284 - 343506626784.2
protein of unknown functionSAMN06295920_107195Not AvailablePositive3435166 - 343618836501.4
fad/fmn-containing dehydrogenaseSAMN06295920_107196Not AvailablePositive3436185 - 343763050131.4
acetylornithine aminotransferase apoenzymeSAMN06295920_107197Not AvailablePositive3437615 - 343881142213.7
res domain-containing proteinSAMN06295920_107198Not AvailableNegative3438830 - 343959428188.1
rna polymerase, sigma 54 subunit, rpon/siglSAMN06295920_107199Not AvailableNegative3439566 - 343994313679.3
acyl-coa dehydrogenaseSAMN06295920_107200Not AvailableNegative3439974 - 344223582000.7
dna-binding transcriptional regulator, lysr familySAMN06295920_107201Not AvailableNegative3442305 - 344323733960.8
two-component system, ompr family, sensor histidine kinase adesSAMN06295920_107202Not AvailableNegative3443341 - 344444139750.0

Displaying genes 3351 – 3360 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.