Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | SAMN06295920_107182 | Not Available | Positive | 3419876 - 3420748 | 29926.0 |
| short-chain dehydrogenase | SAMN06295920_107183 | Not Available | Negative | 3420768 - 3421583 | 27438.9 |
| 2-keto-4-pentenoate hydratase | SAMN06295920_107184 | Not Available | Positive | 3421702 - 3422469 | 27556.0 |
| iron complex outermembrane recepter protein | SAMN06295920_107185 | Not Available | Negative | 3422572 - 3424965 | 86608.0 |
| hypothetical protein | SAMN06295920_107186 | Not Available | Negative | 3425141 - 3426169 | 36271.7 |
| xanthine dehydrogenase accessory factor | SAMN06295920_107187 | Not Available | Positive | 3426372 - 3427343 | 34014.0 |
| methionine synthase (b12-independent) | SAMN06295920_107188 | Not Available | Negative | 3427463 - 3429784 | 85201.9 |
| fructokinase | SAMN06295920_107190 | Not Available | Negative | 3430344 - 3431288 | 32637.2 |
| dna-binding transcriptional regulator, lysr family | SAMN06295920_107191 | Not Available | Negative | 3431324 - 3432241 | 34556.1 |
| benzoate 1,2-dioxygenase, alpha subunit | SAMN06295920_107192 | Not Available | Positive | 3432406 - 3433758 | 50232.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.