Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-terminal half of maoc dehydrataseSAMN06295920_107162Not AvailableNegative3400166 - 340141946153.5
cytochrome p450SAMN06295920_107163Not AvailablePositive3401805 - 340303746320.8
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN06295920_107164Not AvailablePositive3403125 - 340398830139.8
acyl dehydrataseSAMN06295920_107165Not AvailablePositive3403993 - 340485031148.2
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN06295920_107166Not AvailablePositive3404854 - 340560625962.6
predicted dehydrogenaseSAMN06295920_107167Not AvailablePositive3405658 - 340674638537.0
acyl-coa dehydrogenaseSAMN06295920_107168Not AvailableNegative3406767 - 340797843870.4
acyl-coa dehydrogenaseSAMN06295920_107169Not AvailableNegative3407980 - 340908639749.2
acetyl-coa acetyltransferaseSAMN06295920_107170Not AvailableNegative3409093 - 341028642848.0
uncharacterized ob-fold protein, contains zn-ribbon domainSAMN06295920_107171Not AvailableNegative3410289 - 341070815308.4

Displaying genes 3321 – 3330 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.