Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
predicted kinase, aminoglycoside phosphotransferase (apt) familySAMN06295920_107142Not AvailableNegative3380585 - 338162538416.6
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN06295920_107143Not AvailableNegative3381619 - 338199913120.8
glutamate-1-semialdehyde 2,1-aminomutaseSAMN06295920_107144Not AvailableNegative3381999 - 338330046285.7
aldehyde dehydrogenase (nad+)SAMN06295920_107145Not AvailableNegative3383366 - 338484152425.6
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN06295920_107146Not AvailableNegative3384878 - 338567828336.8
crotonobetainyl-coa:carnitine coa-transferase caibSAMN06295920_107147Not AvailableNegative3385689 - 338787277147.7
crotonobetainyl-coa hydrataseSAMN06295920_107148Not AvailableNegative3387869 - 338867828127.8
short chain enoyl-coa hydrataseSAMN06295920_107149Not AvailableNegative3388663 - 338944527948.3
nadph2:quinone reductaseSAMN06295920_107150Not AvailablePositive3389661 - 339067135127.5
acetyl-coa acetyltransferaseSAMN06295920_107151Not AvailableNegative3390672 - 339186243006.1

Displaying genes 3301 – 3310 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.