Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glyoxalase/bleomycin resistance protein/dioxygenase superfamily proteinSAMN06295920_107132Not AvailableNegative3370864 - 337172131354.6
pimeloyl-acp methyl ester carboxylesteraseSAMN06295920_107133Not AvailablePositive3371862 - 337274033784.1
nitronate monooxygenaseSAMN06295920_107134Not AvailableNegative3372752 - 337371433341.0
enoyl-coa hydrataseSAMN06295920_107135Not AvailablePositive3373777 - 337466131380.3
short chain enoyl-coa hydrataseSAMN06295920_107136Not AvailablePositive3374699 - 337549927775.6
hypothetical proteinSAMN06295920_107137Not AvailablePositive3375533 - 337595514491.2
glucose 1-dehydrogenaseSAMN06295920_107138Not AvailableNegative3375978 - 337678428003.5
predicted metal-dependent hydrolase, tim-barrel foldSAMN06295920_107139Not AvailablePositive3376983 - 337833850889.2
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_107140Not AvailableNegative3378445 - 337926628319.6
acyl-coa dehydrogenaseSAMN06295920_107141Not AvailableNegative3379263 - 338056747675.2

Displaying genes 3291 – 3300 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.