Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenaseSAMN06295920_10792Not AvailableNegative3326812 - 332766029740.1
predicted arabinose efflux permease, mfs familySAMN06295920_10793Not AvailableNegative3327809 - 332944958425.0
3-oxoacyl-[acyl-carrier protein] reductase/meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductaseSAMN06295920_10794Not AvailablePositive3329673 - 333054529808.0
sugar phosphate permeaseSAMN06295920_10795Not AvailablePositive3330542 - 333190648153.9
protein of unknown functionSAMN06295920_10796Not AvailableNegative3331915 - 333269728700.2
2-methylcitrate dehydratase prpdSAMN06295920_10797Not AvailablePositive3332918 - 333429148155.0
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_10798Not AvailablePositive3334327 - 333507626494.8
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_10799Not AvailablePositive3335100 - 333588226996.1
sugar phosphate permeaseSAMN06295920_107100Not AvailableNegative3335886 - 333719345045.9
acyl-coa hydrolaseSAMN06295920_107101Not AvailablePositive3337375 - 333861342581.0

Displaying genes 3251 – 3260 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Health Effects

No health effects information available for this bacterium.